John D. Besemer, Ph.D.
Postdoctoral Fellow, Laboratories of Dr. John M. Logsdon & Dr. Mark Borodovsky, Georgia Tech john at amber.biology.gatech.edu Large-scale bioinformatic analyses of prokaryotic genes and genomes. Ph.D. 2002, Georgia Tech. M.Eng. Georgia Tech. B.Eng.
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Besemer J, Borodovsky M. 2005. GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses. Nucleic Acids Res. 33:W451-4.
Huang SH, Chen YH, Kong G, Chen SH, Besemer
J, Borodovsky M, Jong A. 2001. A novel genetic island of meningitic
Escherichia coli K1 containing the ibeA invasion gene (GimA):
functional annotation and carbon-source-regulated invasion of
human brain microvascular endothelial cells. Funct Integr Genomics
1:312-22.
Besemer J,
Lomsadze A, Borodovsky M. 2001. GeneMarkS: a self-training method
for prediction of gene starts in microbial genomes. Implications
for finding sequence motifs in regulatory regions. Nucleic
Acids Res 29:2607-18.
Slupska MM, King AG, Fitz-Gibbon S, Besemer
J, Borodovsky M, Miller JH. 2001. Leaderless transcripts of
the crenarchaeal hyperthermophile Pyrobaculum aerophilum.
J Mol Biol 309:347-60.
Besemer J,
Borodovsky M. 1999. Heuristic approach to deriving models for
gene finding. Nucleic Acids Res. 27:3911-20.
Last modified 19 July 2005.